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अखिल भारतीय आयुर्विज्ञान संस्थान, नई दिल्ली
All India Institute Of Medical Sciences, New Delhi

publication-2019

2019

[1]     Prajapati B, Fatma M, Fatima M, Khan MT, Sinha S, Seth PK. Identification of lncRNAs Associated With Neuroblastoma in Cross-Sectional Databases: Potential Biomarkers. Front Mol Neurosci. 2019 Dec 12;12:293. doi: 10.3389/fnmol.2019.00293. eCollection 2019. PubMed PMID: 31920530; PubMed Central PMCID: PMC6920248.  

[2]     Pandey G, Bakhshi S, Kumar M, Thakur B, Jain P, Kaur P, Chauhan SS. Prognostic and therapeutic relevance of cathepsin B in pediatric acute myeloid leukemia. Am  J Cancer Res. 2019 Dec 1;9(12):2634-2649. eCollection 2019. PubMed PMID: 31911851; PubMed Central PMCID: PMC6943344.  

[3]     Gupta N, Sharma A, Sharma A. Emerging biomarkers in Multiple Myeloma: A review. Clin Chim Acta. 2019 Dec 31;503:45-53. doi: 10.1016/j.cca.2019.12.026. [Epub ahead of print] Review. PubMed PMID: 31901479.  

[4]     Dhar R, Pethusamy K, Singh S, Mukherjee I, Seethy A, Sengupta B, Srivastava T, Sarkar S, Mandal V, Karmakar M, Gupta S, Ghosh A, Karmakar S. Draft genome of Ompok bimaculatus (Pabda fish). BMC Res Notes. 2019 Dec 26;12(1):825. doi: 10.1186/s13104-019-4867-y. PubMed PMID: 31878964; PubMed Central PMCID: PMC6933649.  

[5]     Mehra S, Panwar R, Thakur B, Yadav R, Kumar M, Singh R, Dash NR, Sahni P, Chauhan SS. Expression and Clinical Implications of Cysteine Cathepsins in Gallbladder Carcinoma. Front Oncol. 2019 Nov 22;9:1239. doi: 10.3389/fonc.2019.01239. eCollection 2019. PubMed PMID: 31824841; PubMed Central  PMCID: PMC6883407.  

[6]     Khandelwal M, Anand V, Appunni S, Seth A, Singh P, Mathur S, Sharma A. RASSF1A-Hippo pathway link in patients with urothelial carcinoma of bladder: plausible therapeutic target. Mol Cell Biochem. 2020 Jan;464(1-2):51-63. doi: 10.1007/s11010-019-03648-y. Epub 2019 Nov 21. PubMed PMID: 31754973.  

[7]     Pathak D, Srivastava AK, Padma MV, Gulati S, Rajeswari MR. Quantitative Proteomic and Network Analysis of Differentially Expressed Proteins in PBMC of Friedreich's Ataxia (FRDA) Patients. Front Neurosci. 2019 Oct 14;13:1054. doi: 10.3389/fnins.2019.01054. eCollection 2019. PubMed PMID: 31680804; PubMed Central PMCID: PMC6802492.  

[8]     Panda S, Tiwari A, Luthra K, Sharma SK, Singh A. Association of Fok1 VDR polymorphism with Vitamin D and its associated molecules in pulmonary tuberculosis patients and their household contacts. Sci Rep. 2019 Oct 24;9(1):15251. doi: 10.1038/s41598-019-51803-8. PubMed PMID: 31649297; PubMed Central PMCID: PMC6813333.  

[9]     Saini C, Srivastava RK, Kumar P, Ramesh V, Sharma A. A distinct double positive IL-17A(+)/F(+) T helper 17 cells induced inflammation leads to IL17 producing neutrophils in Type 1 reaction of leprosy patients. Cytokine. 2020 Feb;126:154873. doi: 10.1016/j.cyto.2019.154873. Epub 2019 Oct 16. PubMed PMID: 31629113.  

[10] Singh MK, Singh L, Chosdol K, Pushker N, Saini N, Meel R, Bakhshi S, Sen S, Kashyap S. Differential expression of p52 and RelB proteins in the metastatic and non-metastatic groups of uveal melanoma with patient outcome. J Cancer Res Clin Oncol. 2019 Dec;145(12):2969-2982. doi: 10.1007/s00432-019-03052-5. Epub 2019 Oct 14. PubMed PMID: 31612319.  

[11] Mishra N, Mohata M, Narang R, Lakshmy R, Hazarika A, Pandey RM, Das N, Luthra K. Altered Expression of Complement Regulatory Proteins CD35, CD46, CD55, and CD59 on Leukocyte Subsets in Individuals Suffering From Coronary Artery Disease.  Front Immunol. 2019 Aug 29;10:2072. doi: 10.3389/fimmu.2019.02072. eCollection 2019. PubMed PMID: 31555286; PubMed Central PMCID: PMC6727527.  

[12] Singh MK, Singh L, Chosdol K, Pushker N, Meel R, Bakhshi S, Sen S, Kashyap S. Clinicopathological relevance of NFκB1/p50 nuclear immunoreactivity and its relationship with the inflammatory environment of uveal melanoma. Exp Mol Pathol. 2019 Dec;111:104313. doi: 10.1016/j.yexmp.2019.104313. Epub 2019 Sep 15. PubMed PMID: 31533021.  

[13] Gupta N, Kumar R, Seth T, Garg B, Sharma A. Targeting of stromal versican by  miR-144/199 inhibits multiple myeloma by downregulating FAK/STAT3 signalling. RNA Biol. 2020 Jan;17(1):98-111. doi: 10.1080/15476286.2019.1669405. Epub 2019 Sep 29. PubMed PMID: 31532704; PubMed Central PMCID: PMC6948970.  

[14] Anand V, Khandelwal M, Appunni S, Gupta N, Seth A, Singh P, Mathur S, Sharma  A. CD44 splice variant (CD44v3) promotes progression of urothelial carcinoma of bladder through Akt/ERK/STAT3 pathways: novel therapeutic approach. J Cancer Res  Clin Oncol. 2019 Nov;145(11):2649-2661. doi: 10.1007/s00432-019-03024-9. Epub 2019 Sep 16. PubMed PMID: 31529191.  

[15] Mochan S, Dhingra MK, Gupta SK, Saxena S, Arora P, Yadav V, Rani N, Luthra K, Dwivedi S, Bhatla N, Dhingra R. Status of VEGF in preeclampsia and its effect on  endoplasmic reticulum stress in placental trophoblast cells. Eur J Obstet Gynecol Reprod Biol X. 2019 Jun 21;4:100070. doi: 10.1016/j.eurox.2019.100070. eCollection 2019 Oct. PubMed PMID: 31517301; PubMed Central PMCID: PMC6728727.  

[16] Mann M, Kumar S, Chauhan SS, Bhatla N, Kumar S, Bakhshi S, Gupta R, Sharma A, Kumar L. Correction: PARP-1 inhibitor modulate β-catenin signaling to enhance cisplatin sensitivity in cancer cervix. Oncotarget. 2019 Jul 30;10(46):4802. doi: 10.18632/oncotarget.27101. eCollection 2019 Jul 30. PubMed PMID: 31413820; PubMed Central PMCID: PMC6677665.  

[17] Sharma A, Sharma U, Jagannathan NR, Ray R, Rajeswari MR. Effect of Doxorubicin on Squamous Cell Carcinoma of Skin: Assessment by MRI Relaxometry at  4.7T. Cancer Invest. 2019;37(8):339-354. doi: 10.1080/07357907.2019.1651327. Epub 2019 Aug 14. PubMed PMID: 31412717.  

[18] Mann M, Kumar S, Sharma A, Chauhan SS, Bhatla N, Kumar S, Bakhshi S, Gupta R, Kumar L. PARP-1 inhibitor modulate β-catenin signaling to enhance cisplatin sensitivity in cancer cervix. Oncotarget. 2019 Jul 2;10(42):4262-4275. doi: 10.18632/oncotarget.27008. eCollection 2019 Jul 2. Erratum in: Oncotarget. 2019 Jul 30;10(46):4802. PubMed PMID: 31303961; PubMed Central PMCID: PMC6611509.  

[19] Panda S, Tiwari A, Luthra K, Sharma SK, Singh A. Status of vitamin D and the  associated host factors in pulmonary tuberculosis patients and their household contacts: A cross sectional study. J Steroid Biochem Mol Biol. 2019 Oct;193:105419. doi: 10.1016/j.jsbmb.2019.105419. Epub 2019 Jun 27. PubMed PMID:  31255688.  

[20] Singh A, Pramanik A, Acharya P, Makharia GK. Non-Invasive Biomarkers for Celiac Disease. J Clin Med. 2019 Jun 21;8(6). pii: E885. doi: 10.3390/jcm8060885. Review. PubMed PMID: 31234270; PubMed Central PMCID: PMC6616864.  

[21] Mishra N, Makhdoomi MA, Sharma S, Kumar S, Dobhal A, Kumar D, Chawla H, Singh R, Kanga U, Das BK, Lodha R, Kabra SK, Luthra K. Viral Characteristics Associated with Maintenance of Elite Neutralizing Activity in Chronically HIV-1 Clade C-Infected Monozygotic Pediatric Twins. J Virol. 2019 Aug 13;93(17). pii: e00654-19. doi: 10.1128/JVI.00654-19. Print 2019 Sep 1. PubMed PMID: 31217240; PubMed Central PMCID: PMC6694815.  

[22] Kumar R, Parray HA, Shrivastava T, Sinha S, Luthra K. Phage display antibody  libraries: A robust approach for generation of recombinant human monoclonal antibodies. Int J Biol Macromol. 2019 Aug 15;135:907-918. doi: 10.1016/j.ijbiomac.2019.06.006. Epub 2019 Jun 3. Review. PubMed PMID: 31170490.  

[23] Dhar R, Seethy A, Pethusamy K, Singh S, Rohil V, Purkayastha K, Mukherjee I,  Goswami S, Singh R, Raj A, Srivastava T, Acharya S, Rajashekhar B, Karmakar S. De novo assembly of the Indian blue peacock (Pavo cristatus) genome using Oxford Nanopore technology and Illumina sequencing. Gigascience. 2019 May 1;8(5). pii: giz038. doi: 10.1093/gigascience/giz038. PubMed PMID: 31077316; PubMed Central PMCID: PMC6511069.  

[24] Singh MK, Singh L, Pushker N, Saini N, Meel R, Chosdol K, Bakhshi S, Sen S, Venkatesh P, Chawla B, Kaur J, Kashyap S. Identification of canonical NFκB (C-NFκB) pathway in uveal melanoma and their relation with patient outcome. Clin  Exp Metastasis. 2019 Jun;36(3):271-290. doi: 10.1007/s10585-019-09969-y. Epub 2019 May 8. PubMed PMID: 31069565.  

[25] Bhardwaj M, Sen S, Chosdol K, Bakhshi S, Pushker N, Sharma A, Kashyap S, Bajaj MS, Singh VK. Vimentin overexpression as a novel poor prognostic biomarker  in eyelid sebaceous gland carcinoma. Br J Ophthalmol. 2019 Apr 2. pii: bjophthalmol-2018-313285. doi: 10.1136/bjophthalmol-2018-313285. [Epub ahead of print] PubMed PMID: 30940620.  

[26] Gupta N, Kumar R, Seth T, Garg B, Sati HC, Sharma A. Clinical significance of circulatory microRNA-203 in serum as novel potential diagnostic marker for multiple myeloma. J Cancer Res Clin Oncol. 2019 Jun;145(6):1601-1611. doi: 10.1007/s00432-019-02896-1. Epub 2019 Mar 19. PubMed PMID: 30891618.  

[27] Pathak D, Srivastava AK, Gulati S, Rajeswari MR. Assessment of cell-free levels of iron and copper in patients with Friedreich's ataxia. Biometals. 2019 Apr;32(2):307-315. doi: 10.1007/s10534-019-00186-4. Epub 2019 Mar 14. PubMed PMID: 30874991.  

[28] Das D, Akhtar S, Kurra S, Gupta S, Sharma A. Emerging role of immune cell network in autoimmune skin disorders: An update on pemphigus, vitiligo and psoriasis. Cytokine Growth Factor Rev. 2019 Feb;45:35-44. doi: 10.1016/j.cytogfr.2019.01.001. Epub 2019 Feb 8. Review. PubMed PMID: 30773437.  

[29] Appunni S, Anand V, Khandelwal M, Gupta N, Rubens M, Sharma A. Small Leucine  Rich Proteoglycans (decorin, biglycan and lumican) in cancer. Clin Chim Acta. 2019 Apr;491:1-7. doi: 10.1016/j.cca.2019.01.003. Epub 2019 Jan 7. Review. PubMed PMID: 30629950.  

[30] Singh V, Guleria P, Malik PS, Mohan A, Thulkar S, Pandey RM, Luthra K, Arava  S, Ray R, Jain D. Epidermal growth factor receptor (EGFR), KRAS, and BRAF mutations in lung adenocarcinomas: A study from India. Curr Probl Cancer. 2019 Oct;43(5):391-401. doi: 10.1016/j.currproblcancer.2018.12.003. Epub 2018 Dec 17.  PubMed PMID: 30591192; PubMed Central PMCID: PMC6579716.  

[31] Tiwari V, Rajeswari MR, Tiwari M. Proteomic analysis of iron-regulated membrane proteins identify FhuE receptor as a target to inhibit siderophore-mediated iron acquisition in Acinetobacter baumannii. Int J Biol Macromol. 2019 Mar 15;125:1156-1167. doi: 10.1016/j.ijbiomac.2018.12.173. Epub 2018 Dec 20. PubMed PMID: 30579900.  

[32] Prajapati B, Fatma M, Maddhesiya P, Sodhi MK, Fatima M, Dargar T, Bhagat R, Seth P, Sinha S. Identification and epigenetic analysis of divergent long non-coding RNAs in multilineage differentiation of human Neural Progenitor Cells. RNA Biol. 2019 Jan;16(1):13-24. doi: 10.1080/15476286.2018.1553482. Epub 2018 Dec 27. PubMed PMID: 30574830; PubMed Central PMCID: PMC6380324.  

[33] Kumar S, Panda H, Makhdoomi MA, Mishra N, Safdari HA, Chawla H, Aggarwal H, Reddy ES, Lodha R, Kumar Kabra S, Chandele A, Dutta S, Luthra K. An HIV-1 Broadly Neutralizing Antibody from a Clade C-Infected Pediatric Elite Neutralizer Potently Neutralizes the Contemporaneous and Autologous Evolving Viruses. J Virol. 2019 Feb 5;93(4). pii: e01495-18. doi: 10.1128/JVI.01495-18. Print 2019 Feb 15. PubMed PMID: 30429339; PubMed Central PMCID: PMC6364018.  

[34] Kumar R, Kumari R, Khan L, Sankhyan A, Parray HA, Tiwari A, Wig N, Sinha S, Luthra K. Isolation and Characterization of Cross-Neutralizing Human Anti-V3 Single-Chain Variable Fragments (scFvs) Against HIV-1 from an Antigen Preselected Phage Library. Appl Biochem Biotechnol. 2019 Mar;187(3):1011-1027. doi: 10.1007/s12010-018-2862-8. Epub 2018 Aug 28. PubMed PMID: 30151637.  

[35] Jayasundar R, Ghatak S, Makhdoomi MA, Luthra K, Singh A, Velpandian T. Challenges in integrating component level technology and system level information from Ayurveda: Insights from NMR phytometabolomics and anti-HIV potential of select Ayurvedic medicinal plants. J Ayurveda Integr Med. 2019 Apr - Jun;10(2):94-101. doi: 10.1016/j.jaim.2017.06.002. Epub 2018 Jan 3. PubMed PMID:  29306573; PubMed Central PMCID: PMC6598850.

[36] Ghosh-Jerath S, Downs S, Singh A, Paramanik S, Goldberg G, Fanzo J. Innovative matrix for applying a food systems approach for developing interventions to address nutrient deficiencies in indigenous communities in India: a study protocol. BMC Public Health. 2019 Jul 15;19(1):944. doi:10.1186/s12889-019-6963-2. PubMed PMID: 31307415; PubMed Central PMCID:PMC6631988.

[37] Tyagi A, Pramanik R, Bakhshi R, Singh A, Vishnubhatla S, Bakhshi S. Expression of mitochondrial genes predicts survival in pediatric acute myeloid leukemia. Int J Hematol. 2019 Aug;110(2):205-212. doi: 10.1007/s12185-019-02666-2. Epub 2019 May 22. PubMed PMID: 31119613.

[38] Vincent V, Thakkar H, Aggarwal S, Mridha AR, Ramakrishnan L, Singh A.ATP-binding cassette transporter A1 (ABCA1) expression in adipose tissue and its modulation with insulin resistance in obesity. Diabetes Metab Syndr Obes. 2019 Feb 25;12:275-284. doi: 10.2147/DMSO.S186565. eCollection 2019. Erratum in:Diabetes Metab Syndr Obes. 2019 Dec 11;12:2633. PubMed PMID: 30881070; PubMed Central PMCID: PMC6395069.

[39] Kathpalia P, Nag TC, Chattopadhyay P, Sharma A, Bhat MA, Roy TS, Wadhwa S. In ovo Sound Stimulation Mediated Regulation of BDNF in the Auditory Cortex and Hippocampus of Neonatal Chicks. Neuroscience. 2019 Jun 1;408:293-307. doi: 10.1016/j.neuroscience.2019.04.014. Epub 2019 Apr 24. PubMed PMID: 31026564

[40] Singh RK, Kumar S, Tomar MS, Verma PK, Singh SP, Gautam PK, Acharya A. Classical Protein Kinase C: a novel kinase target in breast cancer. Clin Transl Oncol. 2019 Mar;21(3):259-267. doi: 10.1007/s12094-018-1929-x. Epub 2018 Jul 30. Review. PubMed PMID: 30062522.

[41] Abhyankar YS, Dev S, Sarun OS, Saxena A, Joshi R, Darbari H, Sajish C, Sonavane UB, Gavane V, Deshpande A, Dixit T, Harsh R, Badwe R, Rath GK, Laskar S, Faddegon B, Perl J, Paganetti H, Schuemann J, Srivastava A, Obcemea C, Nath AK, Sharma A, Buchsbaum J. Monte Carlo Processing on a Chip (MCoaC)-preliminary experiments toward the realization of optimal-hardware for TOPAS/Geant4 to drive discovery. Phys Med. 2019 Aug;64:166-173. doi: 10.1016/j.ejmp.2019.06.016. Epub 2019 Jul 16. PubMed PMID: 31515016

[42] Kundu S. Insights into the mechanism(s) of digestion of crystalline cellulose by plant class C GH9 endoglucanases. J Mol Model. 2019 Jul 23;25(8):240. doi: 10.1007/s00894-019-4133-1. PubMed PMID: 31338614.

 

 

 

publication-2018

2018

[1]     Kumawat R, Gowda SH, Debnath E, Rashid S, Niwas R, Gupta Y, Upadaya AD, Suri A, Chandra PS, Gupta DK, Lakshmy R, Sarkar C, Sinha S, Chosdol K. Association of  Single Nucleotide Polymorphisms (SNPs) in Genes Encoding for Folate Metabolising  Enzymes with Glioma and Meningioma in Indian Population. Asian Pac J Cancer Prev. 2018 Dec 25;19(12):3415-3425. PubMed PMID: 30583664; PubMed Central PMCID: PMC6428555.  

[2]     Agrawal S, Bhattacharya A, Manhas J, Kholakiya Y, Khera N, Roychoudhury A, Sen S. Increased Mucin Expression in Oral Mucosal Epithelial Cells in vitro: A Potential New Role of Mycophenolate Mofetil. Tokai J Exp Clin Med. 2018 Dec 20;43(4):132-138. PubMed PMID: 30488399.  

[3]     Saini C, Kumar P, Tarique M, Sharma A, Ramesh V. Regulatory T cells antagonize proinflammatory response of IL-17 during cutaneous tuberculosis. J Inflamm Res. 2018 Sep 28;11:377-388. doi: 10.2147/JIR.S172878. eCollection 2018. PubMed PMID:  30319283; PubMed Central PMCID: PMC6168067.  

[4]     Kumar R, Gupta N, Himani, Sharma A. Novel combination of tanshinone I and lenalidomide induces chemo-sensitivity in myeloma cells by modulating telomerase  activity and expression of shelterin complex and its associated molecules. Mol Biol Rep. 2018 Dec;45(6):2429-2439. doi: 10.1007/s11033-018-4409-z. Epub 2018 Oct 11. PubMed PMID: 30311125.  

[5]     Acharya P, Kutum R, Pandey R, Mishra A, Saha R, Munjal A, Ahuja V, Mukerji M,  Makharia GK. First Degree Relatives of Patients with Celiac Disease Harbour an Intestinal Transcriptomic Signature that Might Protect them from Enterocyte Damage. Clin Transl Gastroenterol. 2018 Oct 8;9(10):195. doi: 10.1038/s41424-018-0059-7. PubMed PMID: 30293993; PubMed Central PMCID: PMC6174158.  

[6]     Chandna P, Srivastava N, Sharma A, Sharma V, Gupta N, Adlakha VK. Isolation of Scardovia wiggsiae using real-time polymerase chain reaction from the saliva of children with early childhood caries. J Indian Soc Pedod Prev Dent. 2018 Jul-Sep;36(3):290-295. doi: 10.4103/JISPPD.JISPPD_225_17. PubMed PMID: 30246752.  

[7]     Devasenapathy S, Midha R, Naskar T, Mehta A, Prajapati B, Ummekulsum M, Sagar R, Singh NC, Sinha S. A pilot Indian family-based association study between dyslexia and Reelin pathway genes, DCDC2 and ROBO1, identifies modest association with a triallelic unit TAT in the gene RELN. Asian J Psychiatr. 2018 Oct;37:121-129. doi: 10.1016/j.ajp.2018.08.020. Epub 2018 Aug 25. PubMed PMID: 30199849.  

[8]     Tarique M, Naz H, Kurra SV, Saini C, Naqvi RA, Rai R, Suhail M, Khanna N, Rao DN, Sharma A. Interleukin-10 Producing Regulatory B Cells Transformed CD4(+)CD25(-) Into Tregs and Enhanced Regulatory T Cells Function in Human Leprosy. Front Immunol. 2018 Jul 23;9:1636. doi: 10.3389/fimmu.2018.01636. eCollection 2018. PubMed PMID: 30083152; PubMed Central PMCID: PMC6065098.  

[9]     Nadella V, Singh S, Jain A, Jain M, Vasquez KM, Sharma A, Tanwar P, Rath GK,  Prakash H. Low dose radiation primed iNOS + M1macrophages modulate angiogenic programming of tumor derived endothelium. Mol Carcinog. 2018 Nov;57(11):1664-1671. doi: 10.1002/mc.22879. Epub 2018 Aug 10. PubMed PMID: 30035346.  

[10] Saini C, Tarique M, Ramesh V, Khanna N, Sharma A. γδ T cells are associated with inflammation and immunopathogenesis of leprosy reactions. Immunol Lett. 2018 Aug;200:55-65. doi: 10.1016/j.imlet.2018.07.005. Epub 2018 Jul 11. PubMed PMID: 30006101.  

[11] Basnet B, Bhushan A, Khan R, Kumar G, Sharma VK, Sharma A, Gupta S. Plasma &  urinary catecholamines & urinary vanillylmandelic acid levels in patients with generalized vitiligo. Indian J Med Res. 2018 Apr;147(4):384-390. doi: 10.4103/ijmr.IJMR_657_16. PubMed PMID: 29998874; PubMed Central PMCID: PMC6057259.  

[12] Kundu S, Sharma R. Origin, evolution, and divergence of plant class C GH9 endoglucanases. BMC Evol Biol. 2018 May 30;18(1):79. doi: 10.1186/s12862-018-1185-2. PubMed PMID: 29848310; PubMed Central PMCID: PMC5977491.  

[13] Jalota A, Kumar M, Das BC, Yadav AK, Chosdol K, Sinha S. A drug combination targeting hypoxia induced chemoresistance and stemness in glioma cells. Oncotarget. 2018 Apr 6;9(26):18351-18366. doi: 10.18632/oncotarget.24839. eCollection 2018 Apr 6. PubMed PMID: 29719610; PubMed Central PMCID: PMC5915077.  

[14] Kundu S. Mathematical Basis of Predicting Dominant Function in Protein Sequences by a Generic HMM-ANN Algorithm. Acta Biotheor. 2018 Jun;66(2):135-148.  doi: 10.1007/s10441-018-9327-x. Epub 2018 Apr 26. PubMed PMID: 29700659.  

[15] Dalal V, Kumar R, Kumar S, Sharma A, Kumar L, Sharma JB, Roy KK, Singh N, Vanamail P. Biomarker potential of IL-6 and VEGF-A in ascitic fluid of epithelial ovarian cancer patients. Clin Chim Acta. 2018 Jul;482:27-32. doi: 10.1016/j.cca.2018.03.019. Epub 2018 Mar 20. PubMed PMID: 29572186.  

[16] Mishra N, Mohata M, Aggarwal H, Chaudhary O, Das BK, Sinha S, Hazarika A, Luthra K. Expression of complement receptor 3 (CR3) and regulatory protein CD46 on dendritic cells of antiretroviral naïve and treated HIV-1 infected individuals: Correlation with immune activation status. Mol Immunol. 2018 Apr;96:83-87. doi: 10.1016/j.molimm.2018.02.011. PubMed PMID: 29525453.  

[17] Chaudhary A, Kumar V, Singh PK, Sharma P, Bairagya HR, Kaur P, Sharma S, Chauhan SS, Singh TP. A glycoprotein from mammary gland secreted during involution promotes apoptosis: Structural and biological studies. Arch Biochem Biophys. 2018 Apr 15;644:72-80. doi: 10.1016/j.abb.2018.03.006. Epub 2018 Mar 7.  PubMed PMID: 29524427.  

[18] Chauhan S, Sen S, Sharma A, Kashyap S, Tandon R, Bajaj MS, Pushker N, Vanathi M, Chauhan SS. p16(INK4a) overexpression as a predictor of survival in ocular surface squamous neoplasia. Br J Ophthalmol. 2018 Jun;102(6):840-847. doi: 10.1136/bjophthalmol-2017-311276. Epub 2018 Mar 6. PubMed PMID: 29511060.  

[19] Khandpur S, Gupta V, Das D, Sharma A. Is there a correlation of serum and tissue T helper-1 and -2 cytokine profiles with psoriasis activity and severity?  A cross-sectional study. Indian J Dermatol Venereol Leprol. 2018 Jul-Aug;84(4):414-418. doi: 10.4103/ijdvl.IJDVL_471_17. PubMed PMID: 29491194.  

[20] Chauhan S, Sen S, Sharma A, Kashyap S, Tandon R, Pushker N, Vanathi M, Chauhan SS. Loss of pRB in Conjunctival Squamous Cell Carcinoma: A Predictor of Poor Prognosis. Appl Immunohistochem Mol Morphol. 2018 Jul;26(6):e70-e76. doi: 10.1097/PAI.0000000000000592. PubMed PMID: 29489511.  

[21] Naskar T, Faruq M, Banerjee P, Khan M, Midha R, Kumari R, Devasenapathy S, Prajapati B, Sengupta S, Jain D, Mukerji M, Singh NC, Sinha S. Ancestral Variations of the PCDHG Gene Cluster Predispose to Dyslexia in a Multiplex Family. EBioMedicine. 2018 Feb;28:168-179. doi: 10.1016/j.ebiom.2017.12.031. Epub 2018 Jan 9. PubMed PMID: 29409727; PubMed Central PMCID: PMC5835549.  

[22] Khandelwal M, Anand V, Appunni S, Seth A, Singh P, Mathur S, Sharma A. Decitabine augments cytotoxicity of cisplatin and doxorubicin to bladder cancer cells by activating hippo pathway through RASSF1A. Mol Cell Biochem. 2018 Sep;446(1-2):105-114. doi: 10.1007/s11010-018-3278-z. Epub 2018 Jan 24. PubMed PMID: 29368096.  

[23] Pandey G, Bakhshi S, Thakur B, Jain P, Chauhan SS. Prognostic significance of cathepsin L expression in pediatric acute myeloid leukemia. Leuk Lymphoma. 2018 Sep;59(9):2175-2187. doi: 10.1080/10428194.2017.1422865. Epub 2018 Jan 18. PubMed PMID: 29345177.  

[24] Khan R, Sharma A, Bhushan A, Basnet B, Sharma VK, Gupta S. Relationship between α-melanocyte stimulating hormone levels and therapeutic outcome of melanocyte transplantation and phototherapy in non-segmental patients with vitiligo: A prospective study. Australas J Dermatol. 2018 Nov;59(4):e315-e318. doi: 10.1111/ajd.12769. Epub 2018 Jan 10. PubMed PMID: 29322506.  

[25] Verma P, K Sharma A, Shankar H, Sharma A, Rao DN. Role of Trace Elements, Oxidative Stress and Immune System: a Triad in Premature Ovarian Failure. Biol Trace Elem Res. 2018 Aug;184(2):325-333. doi: 10.1007/s12011-017-1197-6. Epub 2017 Nov 27. PubMed PMID: 29181820.  

[26] Dantham S, Srivastava AK, Gulati S, Rajeswari MR. Differentially Regulated Cell-Free MicroRNAs in the Plasma of Friedreich's Ataxia Patients and Their Association with Disease Pathology. Neuropediatrics. 2018 Feb;49(1):35-43. doi: 10.1055/s-0037-1607279. Epub 2017 Nov 27. PubMed PMID: 29179232.  

[27] Kumar R, Khan R, Gupta N, Seth T, Sharma A, Kalaivani M, Sharma A. Identifying the biomarker potential of telomerase activity and shelterin complex  molecule, telomeric repeat binding factor 2 (TERF2), in multiple myeloma. Leuk Lymphoma. 2018 Jul;59(7):1677-1689. doi: 10.1080/10428194.2017.1387915. Epub 2017 Oct 18. PubMed PMID: 29043869.  

[28] Srivastava C, Irshad K, Dikshit B, Chattopadhyay P, Sarkar C, Gupta DK, Sinha S, Chosdol K. FAT1 modulates EMT and stemness genes expression in hypoxic glioblastoma. Int J Cancer. 2018 Feb 15;142(4):805-812. doi: 10.1002/ijc.31092. Epub 2017 Oct 17. PubMed PMID: 28994107.  

[29] Alampalli SV, Grover M, Chandran S, Tatu U, Acharya P. Proteome and Structural Organization of the Knob Complex on the Surface of the Plasmodium Infected Red Blood Cell. Proteomics Clin Appl. 2018 Jul;12(4):e1600177. doi: 10.1002/prca.201600177. Epub 2017 Dec 5. PubMed PMID: 28981210. 

[30] Tomar MS, Kumar S, Kumar S, Gautam PK, Singh RK, Verma PK, Singh SP, Acharya  A. NK Cell Effector Functions Regulation by Modulating nTreg Cell Population During Progressive Growth of Dalton's Lymphoma in Mice. Immunol Invest. 2018 Jan;47(1):40-56. doi: 10.1080/08820139.2017.1368545. Epub 2017 Sep 11. PubMed PMID: 28891726.  

[31] Tarique M, Saini C, Naz H, Naqvi RA, Khan FI, Sharma A. Fate of T Cells and their Secretory Proteins During the Progression of Leprosy. Curr Protein Pept Sci. 2018;19(9):889-899. doi: 10.2174/1389203718666170829120729. Review. PubMed PMID: 28847289.  

[32] 38: Das D, Anand V, Khandpur S, Sharma VK, Sharma A. T helper type 1 polarizing γδ T cells and Scavenger receptors contribute to the pathogenesis of Pemphigus vulgaris. Immunology. 2018 Jan;153(1):97-104. doi: 10.1111/imm.12814. Epub 2017 Oct 12. PubMed PMID: 28815581; PubMed Central PMCID: PMC5721249.  

[33] Talukdar A, Rai R, Aparna Sharma K, Rao DN, Sharma A. Peripheral Gamma Delta  T cells secrete inflammatory cytokines in women with idiopathic recurrent pregnancy loss. Cytokine. 2018 Feb;102:117-122. doi: 10.1016/j.cyto.2017.07.018.  Epub 2017 Aug 9. PubMed PMID: 28802663.  

[34] Singh HN, Scheiber-Mojdehkar B, Rajeswari MR. DNA trinucleotide (GAA) repeats in human genome: hint for disease pathogenesis? J Biomol Struct Dyn. 2018 Jun;36(8):1958-1965. doi: 10.1080/07391102.2017.1341336. Epub 2017 Jun 23. PubMed PMID: 28605995.  

[35] Lohani N, Singh HN, Rajeswari MR. Assessment of binding properties of Actinomycin-D to 21nt DNA segment of hmgb1 gene promoter using spectroscopic and  calorimetric techniques. J Biomol Struct Dyn. 2018 Feb;36(2):504-511. doi: 10.1080/07391102.2016.1278037. Epub 2017 Feb 8. PubMed PMID: 28033959. 

[36] Ghosh-Jerath S, Singh A, Lyngdoh T, Magsumbol MS, Kamboj P, Goldberg G.Estimates of Indigenous Food Consumption and Their Contribution to Nutrient Intake in Oraon Tribal Women of Jharkhand, India. Food Nutr Bull. 2018 Dec;39(4):581-594. doi: 10.1177/0379572118805652. Epub 2018 Nov 14. PubMed PMID: 30428716.

[37] Shridhar K, Singh G, Dey S, Singh Dhatt S, Paul Singh Gill J, Goodman M, Samar Magsumbol M, Pearce N, Singh S, Singh A, Singh P, Singh Thakur J, Kaur Dhillon P. Dietary Patterns and Breast Cancer Risk: A Multi-Centre Case Control Study among  North Indian Women. Int J Environ Res Public Health. 2018 Sep 6;15(9). pii:E1946. doi: 10.3390/ijerph15091946. PubMed PMID: 30200632; PubMed Central PMCID: PMC6164652.

[38] Tyagi A, Pramanik R, Vishnubhatla S, Ali S, Bakhshi R, Chopra A, Singh A, Bakhshi S. Pattern of mitochondrial D-loop variations and their relation with mitochondrial encoded genes in pediatric acute myeloid leukemia. Mutat Res. 2018 Jul;810:13-18. doi: 10.1016/j.mrfmmm.2018.05.002. Epub 2018 May 24. PubMed PMID: 29883862.

[39] Jain A, Bakhshi S, Thakkar H, Gerards M, Singh A. Elevated mitochondrial DNA copy numbers in pediatric acute lymphoblastic leukemia: A potential biomarker for predicting inferior survival. Pediatr Blood Cancer. 2018 Mar;65(3). doi:10.1002/pbc.26874. Epub 2017 Nov 14. PubMed PMID: 29134740.

[40] Rashid S, Singh N, Gupta S, Rashid S, Nalika N, Sachdev V, Bal CS, Datta Gupta S, Chauhan SS, Saraya A. Progression of Chronic Pancreatitis to Pancreatic Cancer: Is There a Role of Gene Mutations as a Screening Tool? Pancreas. 2018 Feb;47(2):227-232. doi: 10.1097/MPA.0000000000000975. PubMed PMID: 29303908.

[41] Tiwari V, Poudel RR, Khan SA, Mehra S, Chauhan SS, Raje A. Is VEGF under-expressed in Indian children with Perthes disease? Musculoskelet Surg. 2018 Apr;102(1):81-85. doi: 10.1007/s12306-017-0502-z. Epub 2017 Sep 27. PubMed PMID: 28956304.

 

 

Publication-2016

2016

[1]     Mohan A, Sharma M, Uniyal A, Borah R, Luthra K, Pandey RM, Madan K, Hadda V, Guleria R. Variability in proteinase-antiproteinase balance, nutritional status,  and quality of life in stable chronic obstructive pulmonary disease due to tobacco and nontobacco etiology. Lung India. 2016 Nov-Dec;33(6):605-610. PubMed PMID: 27890988; PubMed Central PMCID: PMC5112816.  

[2]     Lohani N, Rajeswari MR. Dichotomous Life of DNA Binding High Mobility Group Box1 Protein in Human Health and Disease. Curr Protein Pept Sci. 2016;17(8):762-775. Review. PubMed PMID: 26916160.  

[3]     Jalota A, Kumar M, Das BC, Yadav AK, Chosdol K, Sinha S. Synergistic increase  in efficacy of a combination of 2-deoxy-D-glucose and cisplatin in normoxia and hypoxia: switch from autophagy to apoptosis. Tumour Biol. 2016 Sep;37(9):12347-12358. Epub 2016 Jun 15. PubMed PMID: 27306214.   Vikram NK, Latifi AN, Misra A, Luthra K, Bhatt SP, Guleria R, Pandey RM. Waist-to-Height Ratio Compared to Standard Obesity Measures as Predictor of Cardiometabolic Risk Factors in Asian Indians in North India. Metab Syndr Relat Disord. 2016 Dec;14(10):492-499. Epub 2016 Oct 14. PubMed PMID: 27740885.  

[4]     Makhdoomi MA, Singh D, Nair Pananghat A, Lodha R, Kabra SK, Luthra K. Neutralization resistant HIV-1 primary isolates from antiretroviral naïve chronically infected children in India. Virology. 2016 Dec;499:105-113. doi: 10.1016/j.virol.2016.09.011. Epub 2016 Sep 17. PubMed PMID: 27643887.  

[5]     Kundu S, Sharma R. In silico Identification and Taxonomic Distribution of Plant Class C GH9 Endoglucanases. Front Plant Sci. 2016 Aug 12;7:1185. doi: 10.3389/fpls.2016.01185. eCollection 2016. PubMed PMID: 27570528; PubMed Central  PMCID: PMC4981690.  

[6]     Madan E, Dikshit B, Gowda SH, Srivastava C, Sarkar C, Chattopadhyay P, Sinha S, Chosdol K. FAT1 is a novel upstream regulator of HIF1α and invasion of high grade glioma. Int J Cancer. 2016 Dec 1;139(11):2570-82. doi: 10.1002/ijc.30386. Epub 2016 Aug 29. PubMed PMID: 27536856; PubMed Central PMCID: PMC6585695.  

[7]     Kar R, Sharma C, Sen S, Jain SK, Gupta SD, Singh N. Response of primary culture of human ovarian cancer cells to chemotherapy: In vitro individualized therapy. J Cancer Res Ther. 2016 Apr-Jun;12(2):1050-5. doi: 10.4103/0973-1482.161937. PubMed PMID: 27461697.  

[8]     Sharma VK, Singh A, Srivastava SK, Kumar V, Gardi NL, Nalwa A, Dinda AK, Chattopadhyay P, Yadav S. Increased expression of platelet-derived growth factor  associated protein-1 is associated with PDGF-B mediated glioma progression. Int J Biochem Cell Biol. 2016 Sep;78:194-205. doi: 10.1016/j.biocel.2016.07.016. Epub 2016 Jul 19. PubMed PMID: 27448842.  

[9]     Kundu S. Stochastic modelling suggests that an elevated superoxide anion - hydrogen peroxide ratio can drive extravascular phagocyte transmigration by lamellipodium formation. J Theor Biol. 2016 Oct 21;407:143-154. doi: 10.1016/j.jtbi.2016.07.002. Epub 2016 Jul 2. PubMed PMID: 27380944.  

[10] Pananghat AN, Aggarwal H, Prakash SS, Makhdoomi MA, Singh R, Lodha R, Ali S,  Srinivas M, Das BK, Pandey RM, Kabra SK, Luthra K. IL-8 Alterations in HIV-1 Infected Children With Disease Progression. Medicine (Baltimore). 2016 May;95(21):e3734. doi: 10.1097/MD.0000000000003734. PubMed PMID: 27227934; PubMed Central PMCID: PMC4902358.  

[11] Kumar M, Mehra S, Thakar A, Shukla NK, Roychoudhary A, Sharma MC, Ralhan R, Chauhan SS. End Binding 1 (EB1) overexpression in oral lesions and cancer: A biomarker of tumor progression and poor prognosis. Clin Chim Acta. 2016 Aug 1;459:45-52. doi: 10.1016/j.cca.2016.05.012. Epub 2016 May 18. PubMed PMID: 27208742.  

[12] Dantham S, Srivastava AK, Gulati S, Rajeswari MR. Plasma circulating cell-free mitochondrial DNA in the assessment of Friedreich's ataxia. J Neurol Sci. 2016 Jun 15;365:82-8. doi: 10.1016/j.jns.2016.04.016. Epub 2016 Apr 14. PubMed PMID: 27206881.  

[13] Prajapati SC, Chauhan SS. Human dipeptidyl peptidase III mRNA variant I and II are expressed concurrently in multiple tumor derived cell lines and translated at comparable efficiency in vitro. Mol Biol Rep. 2016 Jun;43(6):457-62. doi: 10.1007/s11033-016-3996-9. Epub 2016 May 6. PubMed PMID: 27153830.  

[14] Bhagat M, Palanichamy JK, Ramalingam P, Mudassir M, Irshad K, Chosdol K, Sarkar C, Seth P, Goswami S, Sinha S, Chattopadhyay P. HIF-2α mediates a marked increase in migration and stemness characteristics in a subset of glioma cells under hypoxia by activating an Oct-4/Sox-2-Mena (INV) axis. Int J Biochem Cell Biol. 2016 May;74:60-71. doi: 10.1016/j.biocel.2016.02.017. Epub 2016 Feb 26. PubMed PMID: 26923292.  

[15] Sankhyan A, Sharma C, Dutta D, Sharma T, Chosdol K, Wakita T, Watashi K, Awasthi A, Acharya SK, Khanna N, Tiwari A, Sinha S. Inhibition of preS1-hepatocyte interaction by an array of recombinant human antibodies from naturally recovered individuals. Sci Rep. 2016 Feb 18;6:21240. doi: 10.1038/srep21240. PubMed PMID: 26888694; PubMed Central PMCID: PMC4758072.  

[16] Kumar R, Basu A, Sinha S, Das M, Tripathi P, Jain A, Kumar C, Atam V, Khan S, Singh AS. Role of oral Minocycline in acute encephalitis syndrome in India - a randomized controlled trial. BMC Infect Dis. 2016 Feb 4;16:67. doi: 10.1186/s12879-016-1385-6. PubMed PMID: 26847071; PubMed Central PMCID: PMC4743094.  

[17] Ray B, Agarwal S, Lohani N, Rajeswari MR, Mehrotra R. Structural, conformational and thermodynamic aspects of groove-directed-intercalation of flavopiridol into DNA. J Biomol Struct Dyn. 2016 Nov;34(11):2518-35. doi: 10.1080/07391102.2015.1118708. Epub 2016 Feb 17. PubMed PMID: 26599132.  

[18] Akhter MZ, Luthra K, Rajeswari MR. Molecular aspects on adriamycin interaction with hmga1 regulatory region and its inhibitory effect on HMGA1 expression in human cervical cancer. J Biomol Struct Dyn. 2016;34(4):877-91. doi: 10.1080/07391102.2015.1057617. Epub 2015 Jul 9. PubMed PMID: 26084422.  

[19] Singh HN, Rajeswari MR. Identification of genes containing expanded purine repeats in the human genome and their apparent protective role against cancer. J  Biomol Struct Dyn. 2016;34(4):689-704. doi: 10.1080/07391102.2015.1049553. Epub 2015 Jun 25. PubMed PMID: 25990537. 

[20] Bansal SK, Yadav R. A Study of the Extended Lipid Profile including Oxidized LDL, Small Dense LDL, Lipoprotein (a) and Apolipoproteins in the Assessment of Cardiovascular Risk in Hypothyroid Patients. J Clin Diagn Res. 2016 Jun;10(6):BC04-8. doi: 10.7860/JCDR/2016/19775.8067. Epub 2016 Jun 1. PubMed PMID: 27504276; PubMed Central PMCID: PMC4963636.

[21] Ghosh-Jerath S, Singh A, Magsumbol MS, Kamboj P, Goldberg G. Exploring the Potential of Indigenous Foods to Address Hidden Hunger: Nutritive Value of Indigenous Foods of Santhal Tribal Community of Jharkhand, India. J Hunger Environ Nutr. 2016 Oct 1;11(4):548-568. Epub 2016 May 5. PubMed PMID: 27867449; PubMed Central PMCID: PMC5080971.

[22] Ghosh-Jerath S, Singh A, Magsumbol MS, Lyngdoh T, Kamboj P, Goldberg G.Contribution of indigenous foods towards nutrient intakes and nutritional status of women in the Santhal tribal community of Jharkhand, India. Public Health Nutr.2016 Aug;19(12):2256-67. doi: 10.1017/S1368980016000318. Epub 2016 Mar 16. PubMed PMID: 26982487; PubMed Central PMCID: PMC4988270.

[23] Mir RA, Lovelace J, Schafer NP, Simone PD, Kellezi A, Kolar C, Spagnol G, Sorgen PL, Band H, Band V, Borgstahl GEO. Biophysical characterization and modeling of human Ecdysoneless (ECD) protein supports a scaffolding function. AIMS Biophys. 2016;3(1):195-208. doi: 10.3934/biophy.2016.1.195. Epub 2016 Mar 9. PubMed PMID: 28492064; PubMed Central PMCID: PMC5421643.

[24] Kunjunni R, Sathianathan S, Behari M, Chattopadhyay P, Subbiah V. Silencing of Human CutC Gene (hCutC) Induces Apoptosis in HepG2 Cells. Biol Trace Elem Res.2016 Jul;172(1):120-126. doi: 10.1007/s12011-015-0577-z. Epub 2015 Dec 10. PubMed PMID: 26660891.

 

 

publication-2017

2017

[1]     Singh N, Gupta S, Pandey RM, Sahni P, Chauhan SS, Saraya A. Prognostic significance of plasma matrix metalloprotease-2 in pancreatic cancer patients. Indian J Med Res. 2017 Sep;146(3):334-340. doi: 10.4103/ijmr.IJMR_1348_15. PubMed PMID: 29355139; PubMed Central PMCID: PMC5793467.  

[2]     Ahirwar AK, Singh A, Jain A, Kaim K, Bhardwaj S, Patra SK, Goswami B, Bhatnagar MK, Bhattacharjee J. Association of prothrombotic adipokine (plasminogen activator inhibitor-1) with TSH in metabolic syndrome: a case control study. Horm Mol Biol Clin Investig. 2017 Dec 20;34(1). pii: /j/hmbci.2018.34.issue-1/hmbci-2017-0046/hmbci-2017-0046.xml. doi: 10.1515/hmbci-2017-0046. PubMed PMID: 29261514.  

[3]     Aggarwal H, Khan L, Chaudhary O, Kumar S, Makhdoomi MA, Singh R, Sharma K, Mishra N, Lodha R, Srinivas M, Das BK, Kabra SK, Luthra K. Alterations in B Cell  Compartment Correlate with Poor Neutralization Response and Disease Progression in HIV-1 Infected Children. Front Immunol. 2017 Dec 1;8:1697. doi: 10.3389/fimmu.2017.01697. eCollection 2017. PubMed PMID: 29250072; PubMed Central PMCID: PMC5717014.  

[4]     Kumar S, Kumar R, Khan L, Makhdoomi MA, Thiruvengadam R, Mohata M, Agarwal M,  Lodha R, Kabra SK, Sinha S, Luthra K. CD4-Binding Site Directed Cross-Neutralizing scFv Monoclonals from HIV-1 Subtype C Infected Indian Children. Front Immunol. 2017 Nov 15;8:1568. doi: 10.3389/fimmu.2017.01568. eCollection 2017. PubMed PMID: 29187855; PubMed Central PMCID: PMC5694743.  

[5]     Vibhuti, Khan R, Sharma A, Jain S, Mohanty S, Prasad K. Intra-arterial transplantation of human bone marrow mesenchymal stem cells (hBMMSCs) improves behavioral deficits and alters gene expression in rodent stroke model. J Neurochem. 2017 Dec;143(6):722-735. doi: 10.1111/jnc.14241. Epub 2017 Dec 4. Retraction in: J Neurochem. 2018 Jun;145(6):516. PubMed PMID: 29049855.  

[6]     Dar MS, Singh P, Mir RA, Dar MJ. Βeta-catenin N-terminal domain: An enigmatic region prone to cancer causing mutations. Mutat Res. 2017 Jul;773:122-133. doi: 10.1016/j.mrrev.2017.06.001. Epub 2017 Jun 12. Review. PubMed PMID: 28927523.  

[7]     Kundu S. Mathematical basis of improved protein subfamily classification by a HMM-based sequence filter. Math Biosci. 2017 Nov;293:75-80. doi: 10.1016/j.mbs.2017.09.001. Epub 2017 Sep 13. PubMed PMID: 28916136.  

[8]     Singh A, Gotherwal V, Junni P, Vijayan V, Tiwari M, Ganju P, Kumar A, Sharma  P, Fatima T, Gupta A, Holla A, Kar HK, Khanna S, Thukral L, Malik G, Natarajan K, Gadgil CJ, Lahesmaa R, Natarajan VT, Rani R, Gokhale RS. Mapping architectural and transcriptional alterations in non-lesional and lesional epidermis in vitiligo. Sci Rep. 2017 Aug 29;7(1):9860. doi: 10.1038/s41598-017-10253-w. PubMed PMID: 28852211; PubMed Central PMCID: PMC5575244.  

[9]     Talukdar A, Rai R, Aparna Sharma K, Rao DN, Sharma A. Peripheral Gamma Delta  T cells secrete inflammatory cytokines in women with idiopathic recurrent pregnancy loss. Cytokine. 2018 Feb;102:117-122. doi: 10.1016/j.cyto.2017.07.018.  Epub 2017 Aug 9. PubMed PMID: 28802663.  

[10] Makhdoomi MA, Khan L, Kumar S, Aggarwal H, Singh R, Lodha R, Singla M, Das BK, Kabra SK, Luthra K. Evolution of cross-neutralizing antibodies and mapping epitope specificity in plasma of chronic HIV-1-infected antiretroviral therapy-naïve children from India. J Gen Virol. 2017 Jul;98(7):1879-1891. doi: 10.1099/jgv.0.000824. Epub 2017 Jul 12. PubMed PMID: 28696188.  

[11] Ahirwar AK, Singh A, Jain A, Patra SK, Goswami B, Bhatnagar MK, Bhattacharjee J. Role of Sub Clinical Hypothyroidism in Association with Adiponectin Levels Causing Insulin Resistance in Metabolic Syndrome: A Case Control Study. Tokai J Exp Clin Med. 2017 Jul 20;42(2):96-103. PubMed PMID: 28681370.  

[12] Kumari N, Chaturvedi SK, Khan R, Sharma A, Khan RH, Yadav S. Characterization of CNL like protein fragment (CNL-LPF) from mature Lageneria siceraria seeds. Int J Biol Macromol. 2017 Nov;104(Pt A):1194-1203. doi: 10.1016/j.ijbiomac.2017.06.086. Epub 2017 Jul 1. PubMed PMID: 28676339.  

[13] Mohan A, Poulose R, Gupta T, Luthra K, Pandey RM, Madan K, Hadda V, Guleria R. Impact of chemotherapy on symptom profile, oxidant-antioxidant balance and nutritional status in non-small cell Lung Cancer. Lung India. 2017 Jul-Aug;34(4):336-340. doi: 10.4103/0970-2113.209230. PubMed PMID: 28671164; PubMed Central PMCID: PMC5504890.  

[14] Manchanda M, Das P, Gahlot GPS, Singh R, Roeb E, Roderfeld M, Datta Gupta S,  Saraya A, Pandey RM, Chauhan SS. Cathepsin L and B as Potential Markers for Liver Fibrosis: Insights From Patients and Experimental Models. Clin Transl Gastroenterol. 2017 Jun 15;8(6):e99. doi: 10.1038/ctg.2017.25. PubMed PMID: 28617446; PubMed Central PMCID: PMC5518948.  

[15] Ali A, Kumar S, Kakaria VK, Mohan A, Luthra K, Upadhyay AD, Guleria R. Detection of Promoter DNA Methylation of APC, DAPK, and GSTP1 Genes in tissue Biopsy and Matched Serum of Advanced-Stage Lung Cancer Patients. Cancer Invest. 2017 Jul 3;35(6):423-430. doi: 10.1080/07357907.2017.1309547. Epub 2017 May 19. PubMed PMID: 28524770.  

[16] Irshad K, Jyotsna VP, Agarwal S, Chosdol K, Pal S, Deepak RK. T372R Mutation  Status in Yin Yang 1 Gene in Insulinoma Patients. Horm Metab Res. 2017 Jun;49(6):452-456. doi: 10.1055/s-0043-107244. Epub 2017 May 4. PubMed PMID: 28472826.  

[17] Appunni S, Anand V, Khandelwal M, Seth A, Mathur S, Sharma A. Altered expression of small leucine-rich proteoglycans (Decorin, Biglycan and Lumican): Plausible diagnostic marker in urothelial carcinoma of bladder. Tumour Biol. 2017 May;39(5):1010428317699112. doi: 10.1177/1010428317699112. PubMed PMID: 28459201.  

[18] Kumar Y, Jain V, Chauhan SS, Bharate V, Koli D, Kumar M. Influence of different forms and materials (zirconia or titanium) of abutments in peri-implant soft-tissue healing using matrix metalloproteinase-8: A randomized pilot study. J Prosthet Dent. 2017 Oct;118(4):475-480. doi: 10.1016/j.prosdent.2016.11.017. Epub 2017 Mar 24. PubMed PMID: 28343676.  

[19] Yadav S, Khandelwal M, Seth A, Saini AK, Dogra PN, Sharma A. Serum microRNA Expression Profiling: Potential Diagnostic Implications of a Panel of Serum microRNAs for Clear Cell Renal Cell Cancer. Urology. 2017 Jun;104:64-69. doi: 10.1016/j.urology.2017.03.013. Epub 2017 Mar 20. PubMed PMID: 28336290.  

[20] Khan L, Kumar R, Thiruvengadam R, Parray HA, Makhdoomi MA, Kumar S, Aggarwal  H, Mohata M, Hussain AW, Das R, Varadarajan R, Bhattacharya J, Vajpayee M, Murugavel KG, Solomon S, Sinha S, Luthra K. Cross-neutralizing anti-HIV-1 human single chain variable fragments(scFvs) against CD4 binding site and N332 glycan identified from a recombinant phage library. Sci Rep. 2017 Mar 23;7:45163. doi: 10.1038/srep45163. PubMed PMID: 28332627; PubMed Central PMCID: PMC5362912.  

[21] Neelam L, Rajeswari MR. Molecular and Thermodynamic Studies on DNA Triplex Formed in the Promoter Region of HMGB1 Gene as a Selective Target for Anticancer  Drugs. Anticancer Agents Med Chem. 2017;17(12):1698-1709. doi: 10.2174/1871520617666170213142619. PubMed PMID: 28270074.  

[22] Saini C, Tarique M, Rai R, Siddiqui A, Khanna N, Sharma A. T helper cells in  leprosy: An update. Immunol Lett. 2017 Apr;184:61-66. doi: 10.1016/j.imlet.2017.02.013. Epub 2017 Feb 21. Review. PubMed PMID: 28235552.  

[23] Mohan A, Arora S, Uniyal A, Poulose R, Luthra K, Pandey RM, Guleria R. Evaluation of plasma leptin, tumor necrosis factor-α, and prealbumin as prognostic biomarkers during clinical recovery from acute exacerbations of chronic obstructive pulmonary disease. Lung India. 2017 Jan-Feb;34(1):3-8. doi: 10.4103/0970-2113.197101. PubMed PMID: 28144052; PubMed Central PMCID: PMC5234195.  

[24] Bhardwaj M, Sen S, Chosdol K, Sharma A, Pushker N, Kashyap S, Bakhshi S, Bajaj MS. miRNA-200c and miRNA-141 as potential prognostic biomarkers and regulators of epithelial-mesenchymal transition in eyelid sebaceous gland carcinoma. Br J Ophthalmol. 2017 Apr;101(4):536-542. doi: 10.1136/bjophthalmol-2016-309460. Epub 2017 Jan 24. PubMed PMID: 28119291.  

[25] Tarique M, Saini C, Naqvi RA, Khanna N, Sharma A, Rao DN. IL-12 and IL-23 modulate plasticity of FoxP3(+) regulatory T cells in human Leprosy. Mol Immunol. 2017 Mar;83:72-81. doi: 10.1016/j.molimm.2017.01.008. Epub 2017 Jan 19. PubMed PMID: 28110210.  

[26] Mehra S, Kumar M, Manchanda M, Singh R, Thakur B, Rani N, Arava S, Narang R,  Arya DS, Chauhan SS. Clinical significance of cathepsin L and cathepsin B in dilated cardiomyopathy. Mol Cell Biochem. 2017 Apr;428(1-2):139-147. doi: 10.1007/s11010-016-2924-6. Epub 2017 Jan 10. PubMed PMID: 28074340.  

[27] Gupta B, Das P, Ghosh S, Manhas J, Sen S, Pal S, Sahni P, Upadhyay AD, Panda  SK, Gupta SD. Identification of High-Risk Aberrant Crypt Foci and Mucin-Depleted  Foci in the Human Colon With Study of Colon Cancer Stem Cell Markers. Clin Colorectal Cancer. 2017 Sep;16(3):204-213. doi: 10.1016/j.clcc.2016.09.001. Epub  2016 Sep 20. PubMed PMID: 27789195.  

[28] Akhter MZ, Rajeswari MR. Triplex forming oligonucleotides targeted to hmga1 selectively inhibit its expression and induce apoptosis in human cervical cancer. J Biomol Struct Dyn. 2017 Mar;35(4):689-703. doi: 10.1080/07391102.2016.1160257.  Epub 2016 Mar 21. PubMed PMID: 26923360.

[29] Ahirwar AK, Singh A, Jain A, Patra SK, Goswami B, Bhatnagar MK, Bhattacharjee J. Raised TSH is associated with endothelial dysfunction in Metabolic Syndrome: A case control study. Rom J Intern Med. 2017 Dec 1;55(4):212-221. doi:10.1515/rjim-2017-0023. PubMed PMID: 28640754.

[30] Ghosh-Jerath S, Singh A, Jerath N, Gupta S, Racine EF. Undernutrition and severe acute malnutrition in children. BMJ. 2017 Nov 16;359:j4877. doi:10.1136/bmj.j4877. Erratum in: BMJ. 2017 Dec 4;359:j5632. PubMed PMID: 29146679.

[31] Acharya P, Garg M, Kumar P, Munjal A, Raja KD. Host-Parasite Interactions in Human Malaria: Clinical Implications of Basic Research. Front Microbiol. 2017 May 18;8:889. doi: 10.3389/fmicb.2017.00889. eCollection 2017. Review. PubMed PMID: 28572796; PubMed Central PMCID: PMC5435807.

[32] Olou AA, Sarkar A, Bele A, Gurumurthy CB, Mir RA, Ammons SA, Mirza S, Saleem I, Urano F, Band H, Band V. Mammalian ECD Protein Is a Novel Negative Regulator of the PERK Arm of the Unfolded Protein Response. Mol Cell Biol. 2017 Aug 28;37(18). pii: e00030-17. doi: 10.1128/MCB.00030-17. Print 2017 Sep 15. PubMed PMID: 28652267; PubMed Central PMCID: PMC5574048.

[33] Sharma V, Gupta N, Srivastava N, Rana V, Chandna P, Yadav S, Sharma A. Diagnostic potential of inflammatory biomarkers in early childhood caries  A case control study. Clin Chim Acta. 2017 Aug;471:158-163. doi:10.1016/j.cca.2017.05.037. Epub 2017 Jun 1. PubMed PMID: 28579141.

[34] Zakaria MK, Sarkar DP, Chattopadhyay P. Induction of Transcriptional Gene Silencing by Expression of shRNA Directed to c-Myc P2 Promoter in Hepatocellular Carcinoma by Tissue-Specific Virosomal Delivery. Methods Mol Biol. 2017;1543:245-257. doi: 10.1007/978-1-4939-6716-2_14. PubMed PMID: 28349432

[35] Fernando TR, Contreras JR, Zampini M, Rodriguez-Malave NI, Alberti MO, Anguiano J, Tran TM, Palanichamy JK, Gajeton J, Ung NM, Aros CJ, Waters EV, Casero D, Basso G, Pigazzi M, Rao DS. The lncRNA CASC15 regulates SOX4 expression in RUNX1-rearranged acute leukemia. Mol Cancer. 2017 Jul 19;16(1):126. doi: 10.1186/s12943-017-0692-x. PubMed PMID: 28724437; PubMed Central PMCID: PMC5517805.

 

 

 

Publications-2015

2015

[1]  Singh HN, Rajeswari MR. Gene regulation by long purine tracks in brain related diseases. Data Brief. 2015 Sep 4;5:218-25. doi: 10.1016/j.dib.2015.08.024. eCollection 2015 Dec. PubMed PMID: 26543885; PubMed Central PMCID: PMC4589756.  

[2]     Kulshreshtha P, Tiwari A, Priyanka, Joon S, Sinha S, Bhatnagar R. Investigation of a panel of monoclonal antibodies and polyclonal sera against anthrax toxins resulted in identification of an anti-lethal factor antibody with  disease-enhancing characteristics. Mol Immunol. 2015 Dec;68(2 Pt A):185-93. doi:  10.1016/j.molimm.2015.07.019. Epub 2015 Sep 9. PubMed PMID: 26364143.  

[3]   Kumar M, Matta A, Masui O, Srivastava G, Kaur J, Thakar A, Shukla NK, RoyChoudhury A, Sharma M, Walfish PG, Michael Siu KW, Chauhan SS, Ralhan R. Nuclear heterogeneous nuclear ribonucleoprotein D is associated with poor prognosis and interactome analysis reveals its novel binding partners in oral cancer. J Transl Med. 2015 Aug 30;13:285. doi: 10.1186/s12967-015-0637-3. PubMed  PMID: 26318153; PubMed Central PMCID: PMC4553214.  

[4    Chaudhary O, Kumar S, Bala M, Singh J, Hazarika A, Luthra K. Association of DC-SIGNR Expression in Peripheral Blood Mononuclear Cells with DC-SIGNR Genotypes in HIV-1 Infection. Viral Immunol. 2015 Oct;28(8):472-5. doi: 10.1089/vim.2014.0148. Epub 2015 Aug 27. PubMed PMID: 26313015.  

[5]   Khalifa M, Noureen A, Ertelthalner K, Bandegi AR, Delport R, Firdaus WJ, Geethanjali FS, Luthra K, Makemaharn O, Pang RW, Salem AH, Sasaki J, Schiefenhoevel W, Lingenhel A, Kronenberg F, Utermann G, Schmidt K. Lack of association of rs3798220 with small apolipoprotein(a) isoforms and high lipoprotein(a) levels in East and Southeast Asians. Atherosclerosis. 2015 Oct;242(2):521-8. doi: 10.1016/j.atherosclerosis.2015.07.015. Epub 2015 Jul 15. PubMed PMID: 26302166.  

[6]     Khan I, Zakaria MK, Kumar M, Mani P, Chattopadhyay P, Sarkar DP, Sinha S. A novel placental like alkaline phosphatase promoter driven transcriptional silencing combined with single chain variable fragment antibody based virosomal delivery for neoplastic cell targeting [corrected]. J Transl Med. 2015 Aug 5;13:254. doi: 10.1186/s12967-015-0602-1. Erratum in: J Transl Med. 2015;13:300.  PubMed PMID: 26242403; PubMed Central PMCID: PMC4524171.  

[7]     Kundu S. Co-operative intermolecular kinetics of 2-oxoglutarate dependent dioxygenases may be essential for system-level regulation of plant cell physiology. Front Plant Sci. 2015 Jul 15;6:489. doi: 10.3389/fpls.2015.00489. eCollection 2015. PubMed PMID: 26236316; PubMed Central PMCID: PMC4502536.  

[8]     Bhardwaj M, Sen S, Sharma A, Kashyap S, Chosdol K, Pushker N, Bajaj MS, Bakhshi S. ZEB2/SIP1 as novel prognostic indicator in eyelid sebaceous gland carcinoma. Hum Pathol. 2015 Oct;46(10):1437-42. doi: 10.1016/j.humpath.2015.05.026. Epub 2015 Jun 10. PubMed PMID: 26220160.  

[9]     Singh HN, Rajeswari MR. Role of long purine stretches in controlling the expression of genes associated with neurological disorders. Gene. 2015 Nov 10;572(2):175-83. doi: 10.1016/j.gene.2015.07.007. Epub 2015 Jul 3. PubMed PMID:  26149656.  

[10] Luthra K. Antiviral activity of cystatin C against HIV. Indian J Med Res. 2015 Apr;141(4):383-4. doi: 10.4103/0971-5916.159242. PubMed PMID: 26112837; PubMed Central PMCID: PMC4510716.  

[11] Asothai R, Anand V, Das D, Antil PS, Khandpur S, Sharma VK, Sharma A. Distinctive Treg associated CCR4-CCL22 expression profile with altered frequency  of Th17/Treg cell in the immunopathogenesis of Pemphigus Vulgaris. Immunobiology. 2015 Oct;220(10):1129-35. doi: 10.1016/j.imbio.2015.06.008. Epub 2015 Jun 17. PubMed PMID: 26093920.  

[12] Singh S, Singh A, Sharma D, Singh A, Narula MK, Bhattacharjee J. Effect of l-Arginine on Nitric Oxide Levels in Intrauterine Growth Restriction and its Correlation with Fetal Outcome. Indian J Clin Biochem. 2015 Jul;30(3):298-304. doi: 10.1007/s12291-014-0450-4. Epub 2014 Jul 15. PubMed PMID: 26089616; PubMed Central PMCID: PMC4469053.  

[13] Kassab MA, Mudassir M, Singh A, N M, Bhagat M, Palanichamy JK, Ramalingam P,  Chosdol K, Sinha S, Chattopadhyay P. Gene Silencing and Activation of Human Papillomavirus 18 Is Modulated by Sense Promoter Associated RNA in Bidirectionally Transcribed Long Control Region. PLoS One. 2015 Jun 5;10(6):e0128416. doi: 10.1371/journal.pone.0128416. eCollection 2015. PubMed PMID: 26047143; PubMed Central PMCID: PMC4457724.  

[14]pan style="font:7.0pt "Times New Roman""> Khan L, Makhdoomi MA, Kumar S, Nair A, Andrabi R, Clark BE, Auyeung K, Bhattacharya J, Vajpayee M, Wig N, Pantophlet R, Luthra K. Identification of CD4-Binding Site Dependent Plasma Neutralizing Antibodies in an HIV-1 Infected Indian Individual. PLoS One. 2015 May 11;10(5):e0125575. doi: 10.1371/journal.pone.0125575. eCollection 2015. PubMed PMID: 25962059; PubMed Central PMCID: PMC4427266.  

[15] Kundu S. Unity in diversity, a systems approach to regulating plant cell physiology by 2-oxoglutarate-dependent dioxygenases. Front Plant Sci. 2015 Mar 11;6:98. doi: 10.3389/fpls.2015.00098. eCollection 2015. PubMed PMID: 25814993; PubMed Central PMCID: PMC4356072.  

[16] Irshad K, Mohapatra SK, Srivastava C, Garg H, Mishra S, Dikshit B, Sarkar C,  Gupta D, Chandra PS, Chattopadhyay P, Sinha S, Chosdol K. A combined gene signature of hypoxia and notch pathway in human glioblastoma and its prognostic relevance. PLoS One. 2015 Mar 3;10(3):e0118201. doi: 10.1371/journal.pone.0118201. eCollection 2015. PubMed PMID: 25734817; PubMed Central PMCID: PMC4348203.  

[17] Bure D, Makhdoomi MA, Lodha R, Prakash SS, Kumar R, Parray HA, Singh R, Kabra SK, Luthra K. Mutations in the reverse transcriptase and protease genes of human  immunodeficiency virus-1 from antiretroviral naïve and treated pediatric patients. Viruses. 2015 Feb 10;7(2):590-603. doi: 10.3390/v7020590. PubMed PMID:  25674767; PubMed Central PMCID: PMC4353905.  

[18] Loying P, Manhas J, Sen S, Bose B. Autoregulation and heterogeneity in expression of human Cripto-1. PLoS One. 2015 Feb 6;10(2):e0116748. doi: 10.1371/journal.pone.0116748. eCollection 2015. PubMed PMID: 25658584; PubMed Central PMCID: PMC4319928.  

[19] Gupta N, Khan R, Kumar R, Kumar L, Sharma A. Versican and its associated molecules: potential diagnostic markers for multiple myeloma. Clin Chim Acta. 2015 Mar 10;442:119-24. doi: 10.1016/j.cca.2015.01.012. Epub 2015 Jan 23. PubMed  PMID: 25623955.  

[20] Kumar M, Srivastava G, Kaur J, Assi J, Alyass A, Leong I, MacMillan C, Witterick I, Shukla NK, Thakar A, Duggal R, Roychoudhury A, Sharma MC, Walfish PG, Chauhan SS, Ralhan R. Prognostic significance of cytoplasmic S100A2 overexpression in oral cancer patients. J Transl Med. 2015 Jan 16;13:8. doi: 10.1186/s12967-014-0369-9. PubMed PMID: 25591983; PubMed Central PMCID: PMC4324434.  

[21] Kumar M, Khan I, Sinha S. Nature of immobilization surface affects antibody specificity to placental alkaline phosphatase. J Immunoassay Immunochem. 2015;36(4):405-13. doi: 10.1080/15321819.2014.973117. PubMed PMID: 25321174.  

[22] Lohani N, Narayan Singh H, Agarwal S, Mehrotra R, Rajeswari MR. Interaction of adriamycin with a regulatory element of hmgb1: spectroscopic and calorimetric  approach. J Biomol Struct Dyn. 2015;33(8):1612-23. doi: 10.1080/07391102.2014.967301. Epub 2014 Oct 14. PubMed PMID: 25311659.  

[23] Khatri R, Akhtar N, Mukhopadhyay K, Verma KK, Sethuraman G, Sharma A. Genetic endowment of proinflammatory cytokine tumor necrosis factor-α (-) 308 G > A polymorphism to Parthenium hysterophorus-induced airborne contact dermatitis in an Indian cohort. Int J Dermatol. 2015 Feb;54(2):179-84. doi: 10.1111/ijd.12255.  Epub 2014 Feb 14. PubMed PMID: 24673179.

[24] Ahirwar AK, Jain A, Singh A, Goswami B, Bhatnagar MK, Bhatacharjee J. The study of markers of endothelial dysfunction in metabolic syndrome. Horm Mol Biol Clin Investig. 2015 Dec;24(3):131-6. doi: 10.1515/hmbci-2015-0039. PubMed PMID:26516933.

[25] Ghosh-Jerath S, Devasenapathy N, Singh A, Shankar A, Zodpey S. Ante natal care (ANC) utilization, dietary practices and nutritional outcomes in pregnant and recently delivered women in urban slums of Delhi, India: an exploratory cross-sectional study. Reprod Health. 2015 Mar 20;12:20. doi: 10.1186/s12978-015-0008-9. PubMed PMID: 25889714; PubMed Central PMCID:PMC4396888.

[26] Mir RA, Bele A, Mirza S, Srivastava S, Olou AA, Ammons SA, Kim JH, Gurumurthy CB, Qiu F, Band H, Band V. A Novel Interaction of Ecdysoneless (ECD) Protein with R2TP Complex Component RUVBL1 Is Required for the Functional Role of ECD in Cell  Cycle Progression. Mol Cell Biol. 2015 Dec 28;36(6):886-99. doi: 10.1128/MCB.00594-15. PubMed PMID: 26711270; PubMed Central PMCID: PMC4810467.

[27] Singh N, Gupta S, Pandey RM, Chauhan SS, Saraya A. High levels of cell-free circulating nucleic acids in pancreatic cancer are associated with vascular encasement, metastasis and poor survival. Cancer Invest. 2015 Mar;33(3):78-85.doi: 10.3109/07357907.2014.1001894. Epub 2015 Feb 3. PubMed PMID: 25647443.

[28] Tembhre MK, Parihar AS, Sharma A, Gupta S, Chattopadhyay P, Sharma VK. Participation of T cell immunoglobulin and mucin domain-3 (TIM-3) and its ligand (galectin-9) in the pathogenesis of active generalized vitiligo. Immunol Res.2015 May;62(1):23-34. doi: 10.1007/s12026-015-8632-6. PubMed PMID: 25784621.

[29] Rodríguez-Malavé NI, Fernando TR, Patel PC, Contreras JR, Palanichamy JK, Tran TM, Anguiano J, Davoren MJ, Alberti MO, Pioli KT, Sandoval S, Crooks GM, Rao DS. BALR-6 regulates cell growth and cell survival in B-lymphoblastic leukemia. Mol Cancer. 2015 Dec 22;14:214. doi: 10.1186/s12943-015-0485-z. PubMed PMID:26694754; PubMed Central PMCID: PMC4688921

 

 

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